Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN05444682_107111 | Not Available | Negative | 3685314 - 3687266 | 73206.4 |
| hypothetical protein | SAMN05444682_107112 | Not Available | Positive | 3687426 - 3688175 | 28154.2 |
| hypothetical protein | SAMN05444682_107113 | Not Available | Positive | 3688216 - 3688770 | 19023.8 |
| protein of unknown function | SAMN05444682_107114 | Not Available | Negative | 3688870 - 3689262 | 14560.8 |
| putative n6-adenine-specific dna methylase | SAMN05444682_107115 | Not Available | Positive | 3689409 - 3690602 | 44283.1 |
| uncharacterized protein | SAMN05444682_107116 | Not Available | Positive | 3690586 - 3691230 | 24691.3 |
| tm2 domain-containing protein | SAMN05444682_107117 | Not Available | Negative | 3691227 - 3691565 | 12779.8 |
| protein of unknown function | SAMN05444682_107118 | Not Available | Negative | 3691573 - 3691848 | 10653.1 |
| glycerophosphoryl diester phosphodiesterase | SAMN05444682_107119 | Not Available | Positive | 3692055 - 3692837 | 29509.1 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05444682_107120 | Not Available | Positive | 3692845 - 3693681 | 31485.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
