Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrous oxidase accessory protein | SAMN05444682_107101 | Not Available | Negative | 3675784 - 3676986 | 44998.2 |
| copper chaperone nosl | SAMN05444682_107102 | Not Available | Negative | 3677016 - 3677462 | 16547.8 |
| copper chaperone nosl | SAMN05444682_107103 | Not Available | Negative | 3677459 - 3678052 | 22244.8 |
| nitrous oxide reductase apoprotein | SAMN05444682_107104 | Not Available | Negative | 3678059 - 3680032 | 72751.9 |
| cytochrome c | SAMN05444682_107105 | Not Available | Negative | 3680064 - 3680528 | 17151.4 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444682_107106 | Not Available | Positive | 3680858 - 3681466 | 23029.9 |
| hypothetical protein | SAMN05444682_107107 | Not Available | Positive | 3681497 - 3682735 | 46704.8 |
| fumarase, class ii | SAMN05444682_107108 | Not Available | Positive | 3682793 - 3684163 | 49128.6 |
| hypothetical protein | SAMN05444682_107109 | Not Available | Positive | 3684214 - 3684696 | 18439.2 |
| two component transcriptional regulator, luxr family | SAMN05444682_107110 | Not Available | Negative | 3684710 - 3685321 | 22207.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
