Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic ribonucleoside-triphosphate reductase | SAMN05444682_10791 | Not Available | Negative | 3664868 - 3665050 | 7194.53 |
| ribonucleoside-triphosphate reductase class iii catalytic subunit | SAMN05444682_10792 | Not Available | Negative | 3665250 - 3667346 | 80278.8 |
| mfs transporter, cp family, cyanate transporter | SAMN05444682_10793 | Not Available | Positive | 3667652 - 3668812 | 41667.1 |
| hypothetical protein | SAMN05444682_10794 | Not Available | Negative | 3668823 - 3670679 | 68828.1 |
| metal-sulfur cluster biosynthetic enzyme | SAMN05444682_10795 | Not Available | Negative | 3670780 - 3671109 | 12081.8 |
| hypothetical protein | SAMN05444682_10796 | Not Available | Negative | 3671090 - 3672334 | 45886.7 |
| protein of unknown function | SAMN05444682_10797 | Not Available | Negative | 3672375 - 3673211 | 30874.7 |
| regulator of cell morphogenesis and no signaling | SAMN05444682_10798 | Not Available | Negative | 3673227 - 3674180 | 35768.5 |
| cu-processing system permease protein | SAMN05444682_10799 | Not Available | Negative | 3674295 - 3675062 | 28020.5 |
| cu-processing system atp-binding protein | SAMN05444682_107100 | Not Available | Negative | 3675068 - 3675787 | 26498.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
