Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_10781 | Not Available | Negative | 3654624 - 3655013 | 14444.3 |
| diaminopimelate epimerase | SAMN05444682_10782 | Not Available | Negative | 3655015 - 3655803 | 28896.1 |
| do/deqq family serine protease | SAMN05444682_10783 | Not Available | Positive | 3656144 - 3657712 | 56637.4 |
| putative bacilliredoxin, yphp/yqiw family | SAMN05444682_10784 | Not Available | Negative | 3657796 - 3658206 | 14918.0 |
| adenosylhomocysteinase | SAMN05444682_10785 | Not Available | Positive | 3658366 - 3659679 | 48199.6 |
| nicotinamide-nucleotide adenylyltransferase, nadr type | SAMN05444682_10786 | Not Available | Negative | 3659723 - 3660265 | 20485.8 |
| hypothetical protein | SAMN05444682_10787 | Not Available | Negative | 3660336 - 3660836 | 18158.5 |
| carbamoyl-phosphate synthase large subunit | SAMN05444682_10788 | Not Available | Positive | 3661121 - 3663937 | 104715.0 |
| hypothetical protein | SAMN05444682_10789 | Not Available | Negative | 3663927 - 3664073 | 5172.27 |
| pyruvate formate lyase activating enzyme | SAMN05444682_10790 | Not Available | Negative | 3664210 - 3664887 | 25222.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
