Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor for ferrienterochelin and colicins | SAMN05444682_10771 | Not Available | Negative | 3643153 - 3645672 | 94192.6 |
| atp-dependent clp protease adaptor protein clps | SAMN05444682_10772 | Not Available | Negative | 3645769 - 3646050 | 10580.5 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN05444682_10773 | Not Available | Positive | 3646123 - 3647169 | 38453.7 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN05444682_10774 | Not Available | Negative | 3647254 - 3649197 | 73104.1 |
| atp synthase f1 subcomplex gamma subunit | SAMN05444682_10775 | Not Available | Negative | 3649498 - 3650382 | 32318.0 |
| atp synthase f1 subcomplex alpha subunit | SAMN05444682_10776 | Not Available | Negative | 3650388 - 3651962 | 57012.8 |
| atp synthase f1 subcomplex delta subunit | SAMN05444682_10777 | Not Available | Negative | 3652090 - 3652638 | 20156.7 |
| atp synthase f0 subcomplex b subunit | SAMN05444682_10778 | Not Available | Negative | 3652666 - 3653166 | 18642.7 |
| atp synthase f0 subcomplex c subunit | SAMN05444682_10779 | Not Available | Negative | 3653266 - 3653475 | 6533.35 |
| atp synthase f0 subcomplex a subunit | SAMN05444682_10780 | Not Available | Negative | 3653524 - 3654609 | 40705.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
