Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chain length determinant protein | SAMN05444682_10751 | Not Available | Negative | 3619050 - 3620153 | 40734.4 |
| protein involved in polysaccharide export, contains slbb domain of the beta-grasp fold | SAMN05444682_10752 | Not Available | Negative | 3620173 - 3622677 | 91929.9 |
| capsule assembly protein wzi | SAMN05444682_10753 | Not Available | Positive | 3622802 - 3624556 | 66919.4 |
| capsule assembly protein wzi | SAMN05444682_10754 | Not Available | Positive | 3624603 - 3626327 | 66027.7 |
| hypothetical protein | SAMN05444682_10755 | Not Available | Negative | 3626343 - 3627245 | 34366.3 |
| dtdp-l-rhamnose 4-epimerase | SAMN05444682_10756 | Not Available | Negative | 3627242 - 3628381 | 41944.5 |
| teichuronic acid biosynthesis glycosyltransferase tuag | SAMN05444682_10757 | Not Available | Negative | 3628386 - 3629177 | 30692.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444682_10758 | Not Available | Negative | 3629180 - 3630412 | 46601.0 |
| hypothetical protein | SAMN05444682_10759 | Not Available | Negative | 3630425 - 3631699 | 48606.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444682_10760 | Not Available | Negative | 3631705 - 3632712 | 38984.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
