Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor ts | SAMN05444682_10741 | Not Available | Positive | 3608766 - 3609605 | 30261.2 |
| response regulator receiver domain-containing protein | SAMN05444682_10742 | Not Available | Positive | 3609941 - 3610402 | 17711.5 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN05444682_10743 | Not Available | Negative | 3610425 - 3611510 | 41427.5 |
| hypothetical protein | SAMN05444682_10744 | Not Available | Negative | 3611585 - 3613732 | 80302.7 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN05444682_10745 | Not Available | Negative | 3613738 - 3614532 | 29122.5 |
| hypothetical protein | SAMN05444682_10746 | Not Available | Negative | 3614559 - 3615272 | 26710.4 |
| Trna-met | Not Available | Not Available | Positive | 3615692 - 3615768 | Not Available |
| hypothetical protein | SAMN05444682_10748 | Not Available | Positive | 3615868 - 3616245 | 14933.4 |
| lipopolysaccharide export system permease protein | SAMN05444682_10749 | Not Available | Positive | 3616289 - 3617815 | 58772.2 |
| 3,4-dihydroxy 2-butanone 4-phosphate synthase / gtp cyclohydrolase ii | SAMN05444682_10750 | Not Available | Positive | 3617852 - 3619072 | 44982.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
