Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system atp-binding protein | SAMN05444682_101287 | Not Available | Negative | 342340 - 343095 | 27578.1 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN05444682_101288 | Not Available | Negative | 343135 - 343881 | 28790.5 |
| arylsulfatase a | SAMN05444682_101289 | Not Available | Negative | 343924 - 345471 | 56140.7 |
| right handed beta helix region | SAMN05444682_101290 | Not Available | Negative | 345515 - 347158 | 59961.2 |
| signal transduction histidine kinase | SAMN05444682_101291 | Not Available | Negative | 347276 - 351376 | 153022.0 |
| glycosyl hydrolase catalytic core | SAMN05444682_101292 | Not Available | Positive | 351692 - 353725 | 75087.5 |
| arylsulfatase a | SAMN05444682_101293 | Not Available | Positive | 353752 - 356673 | 108868.0 |
| beta-galactosidase | SAMN05444682_101294 | Not Available | Positive | 356685 - 359183 | 94422.5 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 360207 - 360284 | 18.01 |
| beta-glucuronidase | SAMN05444682_101295 | Not Available | Negative | 359156 - 360934 | 67963.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
