Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna replication and repair protein recn | SAMN05444682_10117 | Not Available | Positive | 22923 - 24584 | 61873.0 |
| enoyl-[acyl-carrier-protein] reductase | SAMN05444682_10118 | Not Available | Positive | 24637 - 25452 | 29541.1 |
| hypothetical protein | SAMN05444682_10119 | Not Available | Negative | 25501 - 25920 | 15519.3 |
| acyl-coa thioester hydrolase | SAMN05444682_10120 | Not Available | Positive | 26116 - 26505 | 15839.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_10121 | Not Available | Positive | 26600 - 27163 | 21711.3 |
| fecr family protein | SAMN05444682_10122 | Not Available | Positive | 27228 - 28337 | 41892.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_10123 | Not Available | Positive | 28506 - 32036 | 131820.0 |
| starch-binding associating with outer membrane | SAMN05444682_10124 | Not Available | Positive | 32054 - 33868 | 68053.2 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05444682_10125 | Not Available | Positive | 33971 - 34771 | 29805.5 |
| atp-dependent clp protease atp-binding subunit clpc | SAMN05444682_10126 | Not Available | Negative | 34853 - 37402 | 95177.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
