Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tfox n-terminal domain-containing protein | SAMN05444682_10721 | Not Available | Negative | 3591124 - 3591459 | 12544.2 |
| Trna-pro | Not Available | Not Available | Positive | 3591689 - 3591765 | Not Available |
| two component transcriptional regulator, lyttr family | SAMN05444682_10723 | Not Available | Negative | 3591848 - 3592561 | 26964.8 |
| histidine kinase | SAMN05444682_10724 | Not Available | Negative | 3592580 - 3593575 | 38643.0 |
| hypothetical protein | SAMN05444682_10725 | Not Available | Positive | 3593819 - 3593998 | 6756.59 |
| iron complex transport system substrate-binding protein | SAMN05444682_10726 | Not Available | Positive | 3594026 - 3594661 | 23958.6 |
| threonine synthase | SAMN05444682_10727 | Not Available | Negative | 3594663 - 3595970 | 47982.3 |
| homoserine kinase | SAMN05444682_10728 | Not Available | Negative | 3595979 - 3596929 | 33668.4 |
| aspartate kinase | SAMN05444682_10729 | Not Available | Negative | 3596973 - 3599420 | 89569.6 |
| lipoprotein spr | SAMN05444682_10730 | Not Available | Positive | 3599802 - 3600377 | 21353.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
