Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein yjbi, contains pentapeptide repeats | SAMN05444682_10711 | Not Available | Positive | 3577370 - 3577945 | 21927.8 |
| phospholipase c | SAMN05444682_10712 | Not Available | Negative | 3578096 - 3580564 | 92857.7 |
| hypothetical protein | SAMN05444682_10713 | Not Available | Positive | 3580692 - 3582512 | 70136.0 |
| membrane protease subunit, stomatin/prohibitin family, contains c-terminal zn-ribbon domain | SAMN05444682_10714 | Not Available | Positive | 3582632 - 3583582 | 35690.9 |
| hypothetical protein | SAMN05444682_10715 | Not Available | Positive | 3583587 - 3583817 | 8484.1 |
| hypothetical protein | SAMN05444682_10716 | Not Available | Positive | 3583822 - 3584610 | 30707.2 |
| hypothetical protein | SAMN05444682_10717 | Not Available | Positive | 3584643 - 3585416 | 28446.2 |
| protein imua | SAMN05444682_10718 | Not Available | Positive | 3585463 - 3586206 | 27398.5 |
| protein imub | SAMN05444682_10719 | Not Available | Positive | 3586209 - 3587711 | 56680.6 |
| error-prone dna polymerase | SAMN05444682_10720 | Not Available | Positive | 3587718 - 3590867 | 118639.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
