Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein ydhg, yjbr/cyay-like superfamily, duf1801 family | SAMN05444682_1071 | Not Available | Negative | 3568693 - 3569073 | 14656.7 |
| doxx-like family protein | SAMN05444682_1072 | Not Available | Negative | 3569066 - 3569440 | 13726.2 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05444682_1073 | Not Available | Negative | 3569467 - 3569886 | 15786.1 |
| transcriptional regulator, arac family with amidase-like domain | SAMN05444682_1074 | Not Available | Positive | 3570112 - 3571089 | 36984.1 |
| flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase) | SAMN05444682_1075 | Not Available | Negative | 3571091 - 3572113 | 37714.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_1076 | Not Available | Positive | 3572437 - 3573687 | 46379.8 |
| dihydrofolate reductase | SAMN05444682_1077 | Not Available | Positive | 3573779 - 3574504 | 26857.8 |
| uncharacterized conserved protein | SAMN05444682_1078 | Not Available | Positive | 3574532 - 3574930 | 14849.5 |
| sulfate permease, sulp family | SAMN05444682_1079 | Not Available | Negative | 3574974 - 3576509 | 55163.4 |
| protein of unknown function | SAMN05444682_10710 | Not Available | Positive | 3576866 - 3577300 | 15900.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
