Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide transport system atp-binding protein | SAMN05444682_106325 | Not Available | Negative | 3559342 - 3560583 | 46290.1 |
| lipopolysaccharide transport system permease protein | SAMN05444682_106326 | Not Available | Negative | 3560588 - 3561418 | 31737.7 |
| hypothetical protein | SAMN05444682_106327 | Not Available | Positive | 3561779 - 3562465 | 24969.3 |
| signal recognition particle subunit ffh/srp54 (srp54) | SAMN05444682_106328 | Not Available | Positive | 3562580 - 3563920 | 48967.6 |
| nadh dehydrogenase subunit a | SAMN05444682_106329 | Not Available | Positive | 3564014 - 3564616 | 22346.7 |
| nadh dehydrogenase subunit b | SAMN05444682_106330 | Not Available | Positive | 3564613 - 3565116 | 18695.0 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | SAMN05444682_106331 | Not Available | Positive | 3565141 - 3566283 | 42579.3 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | SAMN05444682_106332 | Not Available | Positive | 3566313 - 3566822 | 17654.7 |
| hypothetical protein | SAMN05444682_106333 | Not Available | Negative | 3566891 - 3567055 | 6056.4 |
| predicted dehydrogenase | SAMN05444682_106334 | Not Available | Negative | 3567068 - 3568348 | 46888.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
