Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+-dicarboxylate symporter | SAMN05444682_106315 | Not Available | Negative | 3547591 - 3548856 | 45155.9 |
| uncharacterized membrane protein | SAMN05444682_106316 | Not Available | Positive | 3548909 - 3550183 | 45407.5 |
| tonb family c-terminal domain-containing protein | SAMN05444682_106317 | Not Available | Negative | 3550223 - 3551884 | 62005.6 |
| predicted transcriptional regulator | SAMN05444682_106318 | Not Available | Negative | 3551887 - 3552270 | 14999.1 |
| n-acetyl-alpha-d-glucosaminyl l-malate synthase bsha | SAMN05444682_106319 | Not Available | Positive | 3552456 - 3553583 | 41517.0 |
| uridylate kinase | SAMN05444682_106320 | Not Available | Positive | 3553636 - 3554343 | 26063.8 |
| ribosome recycling factor | SAMN05444682_106321 | Not Available | Positive | 3554374 - 3554937 | 20816.1 |
| tfp pilus assembly protein pilf | SAMN05444682_106322 | Not Available | Positive | 3555051 - 3556205 | 43588.2 |
| glycosyl transferase family 2 | SAMN05444682_106323 | Not Available | Negative | 3556274 - 3557266 | 37775.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444682_106324 | Not Available | Negative | 3557269 - 3559329 | 78383.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
