Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secg | SAMN05444682_106284 | Not Available | Positive | 3514230 - 3514580 | 11751.5 |
| chaperonin groes | SAMN05444682_106285 | Not Available | Positive | 3514834 - 3515109 | 9761.76 |
| chaperonin groel | SAMN05444682_106286 | Not Available | Positive | 3515247 - 3516887 | 57862.5 |
| prolyl oligopeptidase family protein | SAMN05444682_106287 | Not Available | Positive | 3517074 - 3518222 | 43151.2 |
| ntp pyrophosphatase, house-cleaning of non-canonical ntps | SAMN05444682_106288 | Not Available | Negative | 3518223 - 3518549 | 12528.9 |
| d-tyrosyl-trna(tyr) deacylase | SAMN05444682_106289 | Not Available | Negative | 3518589 - 3519047 | 16786.5 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN05444682_106290 | Not Available | Negative | 3519047 - 3520288 | 44738.6 |
| iron complex outermembrane recepter protein | SAMN05444682_106291 | Not Available | Negative | 3520409 - 3522874 | 92329.1 |
| putative membrane-bound dehydrogenase domain-containing protein | SAMN05444682_106293 | Not Available | Negative | 3523195 - 3526695 | 129492.0 |
| predicted dehydrogenase | SAMN05444682_106294 | Not Available | Negative | 3526761 - 3527888 | 41932.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
