Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN05444682_106274 | Not Available | Positive | 3503502 - 3504497 | 35832.0 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | SAMN05444682_106275 | Not Available | Positive | 3504593 - 3505060 | 16936.3 |
| acetyl-coa carboxylase, biotin carboxylase subunit | SAMN05444682_106276 | Not Available | Positive | 3505131 - 3506471 | 49464.1 |
| sec-independent protein translocase protein tatc | SAMN05444682_106277 | Not Available | Positive | 3506543 - 3507427 | 33057.2 |
| ribose 5-phosphate isomerase b | SAMN05444682_106278 | Not Available | Positive | 3507431 - 3507874 | 15663.5 |
| peptidase family m28 | SAMN05444682_106279 | Not Available | Positive | 3507962 - 3509539 | 57952.5 |
| pp_02873 | SAMN05444682_106280 | Not Available | Positive | 3510082 - 3511485 | Not Available |
| regulatory protein, fis family | SAMN05444682_106281 | Not Available | Positive | 3511446 - 3512735 | 48610.2 |
| lipopolysaccharide-assembly | SAMN05444682_106282 | Not Available | Positive | 3512774 - 3513259 | 17793.9 |
| hypothetical protein | SAMN05444682_106283 | Not Available | Positive | 3513268 - 3514218 | 36327.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
