Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN05444682_106264 | Not Available | Negative | 3495562 - 3496527 | 36757.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_106265 | Not Available | Negative | 3496520 - 3497098 | 22780.7 |
| transglutaminase-like superfamily protein | SAMN05444682_106266 | Not Available | Positive | 3497171 - 3498025 | 32545.2 |
| hypothetical protein | SAMN05444682_106267 | Not Available | Negative | 3498030 - 3499157 | 40178.9 |
| hypothetical protein | SAMN05444682_106268 | Not Available | Positive | 3499287 - 3499967 | 26418.0 |
| carboxymethylenebutenolidase | SAMN05444682_106269 | Not Available | Negative | 3499948 - 3500799 | 30500.2 |
| thiol peroxidase, atypical 2-cys peroxiredoxin | SAMN05444682_106270 | Not Available | Negative | 3500817 - 3501422 | 21577.2 |
| uncharacterized metal-binding protein yced, duf177 family | SAMN05444682_106271 | Not Available | Positive | 3501646 - 3502173 | 20049.8 |
| large subunit ribosomal protein l32 | SAMN05444682_106272 | Not Available | Positive | 3502183 - 3502374 | 7218.74 |
| phosphate:acyl-[acyl carrier protein] acyltransferase | SAMN05444682_106273 | Not Available | Positive | 3502556 - 3503497 | 33573.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
