Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444682_106254 | Not Available | Positive | 3486175 - 3486531 | 13319.8 |
| hypothetical protein | SAMN05444682_106255 | Not Available | Negative | 3486533 - 3487090 | 20155.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_106256 | Not Available | Positive | 3487141 - 3487731 | 22445.7 |
| fecr family protein | SAMN05444682_106257 | Not Available | Positive | 3487787 - 3488761 | 36625.7 |
| outer membrane receptor proteins, mostly fe transport | SAMN05444682_106258 | Not Available | Positive | 3488775 - 3491462 | 99159.8 |
| protein of unknown function | SAMN05444682_106259 | Not Available | Positive | 3491470 - 3492390 | 34859.0 |
| hypothetical protein | SAMN05444682_106260 | Not Available | Negative | 3492387 - 3492818 | 16621.9 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN05444682_106261 | Not Available | Negative | 3492846 - 3493742 | 34288.1 |
| hypothetical protein | SAMN05444682_106262 | Not Available | Negative | 3493726 - 3493875 | 5728.12 |
| hypothetical protein | SAMN05444682_106263 | Not Available | Negative | 3493956 - 3495515 | 57070.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
