Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_106214 | Not Available | Positive | 3430614 - 3431090 | 19011.4 |
| plasmid stabilization system protein pare | SAMN05444682_106215 | Not Available | Negative | 3431091 - 3431378 | 11738.3 |
| hypothetical protein | SAMN05444682_106216 | Not Available | Negative | 3431388 - 3431627 | 9141.85 |
| transcription-repair coupling factor | SAMN05444682_106217 | Not Available | Negative | 3431726 - 3435058 | 126348.0 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05444682_106218 | Not Available | Negative | 3435104 - 3435673 | 20452.9 |
| galactose oxidase, central domain | SAMN05444682_106219 | Not Available | Negative | 3435762 - 3436748 | 36108.3 |
| protein of unknown function | SAMN05444682_106220 | Not Available | Negative | 3436753 - 3438135 | 50713.0 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN05444682_106221 | Not Available | Positive | 3438258 - 3439769 | 56543.6 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05444682_106222 | Not Available | Positive | 3439766 - 3440440 | 26190.8 |
| tetratricopeptide repeat-containing protein | SAMN05444682_106223 | Not Available | Negative | 3440462 - 3442477 | 76645.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
