Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-1,2-mannosidase, putative | SAMN05444682_106194 | Not Available | Negative | 3405906 - 3408092 | 81196.7 |
| putative membrane-bound dehydrogenase domain-containing protein | SAMN05444682_106195 | Not Available | Negative | 3408103 - 3410316 | 81716.9 |
| cytochrome c/hypothetical protein | SAMN05444682_106196 | Not Available | Negative | 3410362 - 3411102 | 27193.1 |
| lysophospholipase l1 | SAMN05444682_106197 | Not Available | Negative | 3411152 - 3414949 | 140244.0 |
| hypothetical protein | SAMN05444682_106198 | Not Available | Negative | 3414966 - 3416264 | 48876.1 |
| predicted dehydrogenase | SAMN05444682_106199 | Not Available | Negative | 3416576 - 3417856 | 47718.9 |
| hypothetical protein | SAMN05444682_106200 | Not Available | Negative | 3417862 - 3417960 | 3873.86 |
| iron complex outermembrane recepter protein | SAMN05444682_106201 | Not Available | Positive | 3418301 - 3420763 | 91267.3 |
| uncharacterized iron-regulated membrane protein | SAMN05444682_106202 | Not Available | Positive | 3420775 - 3422121 | 50464.1 |
| hypothetical protein | SAMN05444682_106203 | Not Available | Positive | 3422118 - 3422393 | 10612.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
