Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| repeat domain-containing protein | SAMN05444682_106184 | Not Available | Negative | 3388646 - 3390595 | 71712.5 |
| sugar phosphate isomerase/epimerase | SAMN05444682_106185 | Not Available | Negative | 3390606 - 3391517 | 34869.6 |
| quinoprotein glucose dehydrogenase | SAMN05444682_106186 | Not Available | Negative | 3391520 - 3393793 | 82431.4 |
| sugar phosphate permease | SAMN05444682_106187 | Not Available | Negative | 3394074 - 3395315 | 45566.6 |
| protein of unknown function | SAMN05444682_106188 | Not Available | Negative | 3395333 - 3395770 | 15790.1 |
| hypothetical protein | SAMN05444682_106189 | Not Available | Negative | 3395782 - 3396753 | 36377.4 |
| quinoprotein glucose dehydrogenase | SAMN05444682_106190 | Not Available | Negative | 3396770 - 3398944 | 79113.5 |
| mannonate dehydratase | SAMN05444682_106191 | Not Available | Negative | 3398957 - 3400330 | 51240.0 |
| hypothetical protein | SAMN05444682_106192 | Not Available | Negative | 3400513 - 3403077 | 96772.7 |
| hypothetical protein | SAMN05444682_106193 | Not Available | Negative | 3403288 - 3405900 | 99025.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
