Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose 5-phosphate isomerase b | SAMN05444682_106174 | Not Available | Negative | 3373360 - 3373821 | 16530.8 |
| hypothetical protein | SAMN05444682_106175 | Not Available | Negative | 3373951 - 3375216 | 47465.6 |
| hypothetical protein | SAMN05444682_106176 | Not Available | Negative | 3375228 - 3376463 | 45530.4 |
| hypothetical protein | SAMN05444682_106177 | Not Available | Negative | 3376486 - 3377751 | 48427.2 |
| alpha-1,2-mannosidase, putative | SAMN05444682_106178 | Not Available | Negative | 3377763 - 3380024 | 85063.4 |
| hypothetical protein | SAMN05444682_106179 | Not Available | Negative | 3380058 - 3381395 | 50272.6 |
| protein of unknown function | SAMN05444682_106180 | Not Available | Negative | 3381560 - 3382300 | 27704.7 |
| starch-binding associating with outer membrane | SAMN05444682_106181 | Not Available | Negative | 3382323 - 3384251 | 73628.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_106182 | Not Available | Negative | 3384349 - 3387492 | 116889.0 |
| hypothetical protein | SAMN05444682_106183 | Not Available | Negative | 3387811 - 3388224 | 14860.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
