Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemoglobin | SAMN05444682_106164 | Not Available | Negative | 3362406 - 3362795 | 15352.6 |
| calcineurin-like phosphoesterase | SAMN05444682_106165 | Not Available | Negative | 3362931 - 3364475 | 57868.7 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05444682_106166 | Not Available | Negative | 3364602 - 3365720 | 42415.1 |
| hypothetical protein | SAMN05444682_106167 | Not Available | Negative | 3365816 - 3366001 | 6871.62 |
| hypothetical protein | SAMN05444682_106168 | Not Available | Negative | 3365998 - 3366312 | 12333.9 |
| hypothetical protein | SAMN05444682_106169 | Not Available | Negative | 3366358 - 3366531 | 6382.95 |
| putative membrane-bound dehydrogenase domain-containing protein | SAMN05444682_106170 | Not Available | Positive | 3366559 - 3369945 | 124960.0 |
| hypothetical protein | SAMN05444682_106171 | Not Available | Negative | 3370002 - 3370691 | 25160.5 |
| 6-phosphogluconolactonase | SAMN05444682_106172 | Not Available | Negative | 3370842 - 3371558 | 26867.8 |
| glucose-6-phosphate 1-dehydrogenase | SAMN05444682_106173 | Not Available | Negative | 3371669 - 3373171 | 57249.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
