Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoamide dehydrogenase | SAMN05444682_101267 | Not Available | Negative | 320362 - 321768 | 49984.3 |
| azurin | SAMN05444682_101268 | Not Available | Negative | 321860 - 322399 | 18970.8 |
| signal transduction histidine kinase | SAMN05444682_101269 | Not Available | Negative | 322491 - 324098 | 60416.0 |
| cheb methylesterase | SAMN05444682_101270 | Not Available | Negative | 324086 - 324664 | 20901.2 |
| chemotaxis protein methyltransferase cher | SAMN05444682_101271 | Not Available | Negative | 324708 - 325520 | 31385.8 |
| signal transduction histidine kinase | SAMN05444682_101272 | Not Available | Negative | 325534 - 328575 | 113947.0 |
| hypothetical protein | SAMN05444682_101273 | Not Available | Negative | 328686 - 329849 | 44799.1 |
| putative auto-transporter adhesin, head gin domain | SAMN05444682_101274 | Not Available | Positive | 330014 - 330739 | 25297.0 |
| uncharacterized protein yqfa, upf0365 family | SAMN05444682_101275 | Not Available | Positive | 330837 - 331829 | 35297.9 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | SAMN05444682_101276 | Not Available | Positive | 332247 - 332765 | 18808.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
