Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_106154 | Not Available | Negative | 3356685 - 3356858 | 6007.37 |
| arac-type dna-binding protein | SAMN05444682_106155 | Not Available | Negative | 3356940 - 3357719 | 29480.9 |
| caax protease self-immunity | SAMN05444682_106156 | Not Available | Negative | 3357812 - 3358465 | 24697.9 |
| hypothetical protein | SAMN05444682_106157 | Not Available | Negative | 3358556 - 3359323 | 29636.4 |
| transcriptional regulator, arsr family | SAMN05444682_106158 | Not Available | Positive | 3359534 - 3359857 | 12579.2 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05444682_106159 | Not Available | Positive | 3359860 - 3360327 | 17928.5 |
| doxx-like family protein | SAMN05444682_106160 | Not Available | Positive | 3360334 - 3360714 | 14150.9 |
| protein of unknown function | SAMN05444682_106161 | Not Available | Positive | 3360734 - 3361300 | 21593.3 |
| thioredoxin | SAMN05444682_106162 | Not Available | Positive | 3361348 - 3362061 | 26684.5 |
| uncharacterized conserved protein yeao, duf488 family | SAMN05444682_106163 | Not Available | Negative | 3362042 - 3362398 | 13884.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
