Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oxidoreductase | SAMN05444682_106144 | Not Available | Positive | 3349112 - 3349519 | 14319.1 |
| Trna-glu | Not Available | Not Available | Positive | 3349810 - 3349881 | Not Available |
| superfamily i dna and/or rna helicase | SAMN05444682_106146 | Not Available | Positive | 3350179 - 3353238 | 116244.0 |
| hypothetical protein | SAMN05444682_106147 | Not Available | Negative | 3353188 - 3353361 | 6500.0 |
| hypothetical protein | SAMN05444682_106148 | Not Available | Positive | 3353758 - 3353901 | 5323.82 |
| hypothetical protein | SAMN05444682_106149 | Not Available | Positive | 3353936 - 3354298 | 14142.3 |
| transposase inso and inactivated derivatives | SAMN05444682_106150 | Not Available | Negative | 3354368 - 3355498 | 43247.6 |
| hypothetical protein | SAMN05444682_106151 | Not Available | Negative | 3355565 - 3355705 | 5044.29 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05444682_106152 | Not Available | Negative | 3355731 - 3356147 | 15788.2 |
| uncharacterized membrane protein | SAMN05444682_106153 | Not Available | Negative | 3356182 - 3356673 | 18312.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
