Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine dehydrogenase | SAMN05444682_106134 | Not Available | Negative | 3338353 - 3339564 | 44182.9 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN05444682_106135 | Not Available | Positive | 3339778 - 3341706 | 73069.4 |
| tetratricopeptide repeat-containing protein | SAMN05444682_106136 | Not Available | Positive | 3341779 - 3342456 | 24957.5 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN05444682_106137 | Not Available | Positive | 3342456 - 3342941 | 17081.4 |
| hypothetical protein | SAMN05444682_106138 | Not Available | Positive | 3343239 - 3343988 | 27660.7 |
| heat shock protein hsp15 | SAMN05444682_106139 | Not Available | Negative | 3343985 - 3344383 | 15256.3 |
| 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase | SAMN05444682_106140 | Not Available | Positive | 3344532 - 3345383 | 31152.0 |
| l-threonylcarbamoyladenylate synthase | SAMN05444682_106141 | Not Available | Positive | 3345426 - 3346004 | 21256.4 |
| dihydropteroate synthase | SAMN05444682_106142 | Not Available | Positive | 3346063 - 3346869 | 29060.3 |
| methionyl-trna synthetase | SAMN05444682_106143 | Not Available | Negative | 3346879 - 3348954 | 78748.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
