Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_106104 | Not Available | Negative | 3307620 - 3308570 | 35967.1 |
| dna-directed rna polymerase subunit beta' | SAMN05444682_106105 | Not Available | Negative | 3308681 - 3312961 | 159283.0 |
| dna-directed rna polymerase subunit beta | SAMN05444682_106106 | Not Available | Negative | 3312996 - 3316805 | 142923.0 |
| large subunit ribosomal protein l7/l12 | SAMN05444682_106107 | Not Available | Negative | 3316984 - 3317364 | 12965.6 |
| lsu ribosomal protein l10p | SAMN05444682_106108 | Not Available | Negative | 3317439 - 3317957 | 18434.5 |
| large subunit ribosomal protein l1 | SAMN05444682_106109 | Not Available | Negative | 3317960 - 3318658 | 24770.2 |
| lsu ribosomal protein l11p | SAMN05444682_106110 | Not Available | Negative | 3318681 - 3319124 | 15529.9 |
| transcription antitermination protein nusg | SAMN05444682_106111 | Not Available | Negative | 3319278 - 3319823 | 20671.3 |
| preprotein translocase subunit sece | SAMN05444682_106112 | Not Available | Negative | 3319841 - 3320035 | 7185.8 |
| Trna-trp | Not Available | Not Available | Positive | 3320052 - 3320125 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
