Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN05444682_10694 | Not Available | Negative | 3296040 - 3297731 | 61939.7 |
| hypothetical protein | SAMN05444682_10695 | Not Available | Negative | 3297800 - 3298474 | 26736.9 |
| tyrosyl-trna synthetase | SAMN05444682_10696 | Not Available | Positive | 3298585 - 3299868 | 47936.2 |
| hypothetical protein | SAMN05444682_10697 | Not Available | Positive | 3300090 - 3300641 | 20533.2 |
| protein of unknown function | SAMN05444682_10698 | Not Available | Negative | 3300810 - 3301550 | 26906.6 |
| dna segregation atpase ftsk/spoiiie, s-dna-t family | SAMN05444682_10699 | Not Available | Positive | 3301673 - 3304261 | 96195.2 |
| outer membrane lipoprotein-sorting protein | SAMN05444682_106100 | Not Available | Positive | 3304264 - 3304920 | 24187.5 |
| transglycosylase slt domain-containing protein | SAMN05444682_106101 | Not Available | Negative | 3304927 - 3305733 | 30415.3 |
| 23s rrna pseudouridine2605 synthase | SAMN05444682_106102 | Not Available | Positive | 3305979 - 3307124 | 44125.1 |
| phosphoribosyl-atp pyrophosphohydrolase | SAMN05444682_106103 | Not Available | Positive | 3307163 - 3307633 | 17902.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
