Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN05444682_10664 | Not Available | Negative | 3254709 - 3256169 | 55445.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_10665 | Not Available | Negative | 3256205 - 3259636 | 124372.0 |
| fecr family protein | SAMN05444682_10666 | Not Available | Negative | 3259796 - 3260962 | 42997.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_10667 | Not Available | Negative | 3261092 - 3261688 | 23289.2 |
| hypothetical protein | SAMN05444682_10668 | Not Available | Positive | 3261772 - 3262017 | 9671.71 |
| arylsulfatase a | SAMN05444682_10669 | Not Available | Negative | 3262095 - 3263561 | 54654.6 |
| arylsulfatase a | SAMN05444682_10670 | Not Available | Negative | 3263558 - 3265396 | 69527.5 |
| arylsulfatase a | SAMN05444682_10671 | Not Available | Negative | 3265441 - 3266868 | 53243.2 |
| arylsulfatase a | SAMN05444682_10672 | Not Available | Negative | 3266908 - 3268278 | 51365.2 |
| arylsulfatase a | SAMN05444682_10673 | Not Available | Negative | 3268292 - 3269617 | 49137.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
