Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-coa synthetase beta subunit | SAMN05444682_101257 | Not Available | Negative | 311114 - 312304 | 42908.6 |
| lipoprotein-releasing system atp-binding protein | SAMN05444682_101258 | Not Available | Positive | 312386 - 313057 | 24138.0 |
| hypothetical protein | SAMN05444682_101259 | Not Available | Positive | 313047 - 313535 | 17839.7 |
| hypothetical protein | SAMN05444682_101260 | Not Available | Positive | 313634 - 314266 | 24260.4 |
| peptidase family s41 | SAMN05444682_101261 | Not Available | Positive | 314293 - 315717 | 52812.2 |
| transcriptional regulator, laci family | SAMN05444682_101262 | Not Available | Positive | 315760 - 316770 | 37560.3 |
| hypothetical protein | SAMN05444682_101263 | Not Available | Negative | 316782 - 317867 | 39448.1 |
| dihydrolipoamide dehydrogenase | SAMN05444682_101264 | Not Available | Negative | 318067 - 319455 | 49344.5 |
| integral membrane protein | SAMN05444682_101265 | Not Available | Positive | 319657 - 319965 | 11927.8 |
| acyl-coa hydrolase | SAMN05444682_101266 | Not Available | Negative | 319962 - 320351 | 14423.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
