Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_10654 | Not Available | Negative | 3238742 - 3239419 | 25826.5 |
| cephalosporin-c deacetylase | SAMN05444682_10655 | Not Available | Negative | 3239438 - 3241600 | 80452.1 |
| membrane dipeptidase | SAMN05444682_10656 | Not Available | Negative | 3241685 - 3243052 | 50285.5 |
| starch-binding associating with outer membrane | SAMN05444682_10657 | Not Available | Negative | 3243180 - 3244898 | 65111.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_10658 | Not Available | Negative | 3244908 - 3248333 | 126425.0 |
| fecr family protein | SAMN05444682_10659 | Not Available | Negative | 3248511 - 3249713 | 44701.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_10660 | Not Available | Negative | 3249829 - 3250410 | 23048.1 |
| methane oxygenase pmoa | SAMN05444682_10661 | Not Available | Negative | 3250515 - 3251585 | 39499.2 |
| predicted dehydrogenase | SAMN05444682_10662 | Not Available | Negative | 3251608 - 3252987 | 51472.8 |
| arylsulfatase a | SAMN05444682_10663 | Not Available | Negative | 3253277 - 3254695 | 52305.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
