Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrous iron transport protein b | SAMN05444682_10644 | Not Available | Positive | 3223729 - 3225813 | 76914.2 |
| virus attachment protein p12 family protein | SAMN05444682_10645 | Not Available | Positive | 3225815 - 3225988 | 6211.65 |
| mannose-6-phosphate isomerase, type 2 | SAMN05444682_10646 | Not Available | Positive | 3226009 - 3226509 | 19087.3 |
| glycosyl hydrolase family 76 | SAMN05444682_10647 | Not Available | Negative | 3226515 - 3227720 | 46028.5 |
| choline dehydrogenase | SAMN05444682_10648 | Not Available | Negative | 3227720 - 3229435 | 64983.4 |
| gluconate 2-dehydrogenase subunit 3 | SAMN05444682_10649 | Not Available | Negative | 3229480 - 3230001 | 19333.1 |
| cephalosporin-c deacetylase | SAMN05444682_10650 | Not Available | Negative | 3230079 - 3232241 | 80854.3 |
| starch-binding associating with outer membrane | SAMN05444682_10651 | Not Available | Negative | 3232292 - 3233920 | 62628.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_10652 | Not Available | Negative | 3233934 - 3237308 | 125391.0 |
| fecr family protein | SAMN05444682_10653 | Not Available | Negative | 3237503 - 3238675 | 43917.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
