Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444682_10634 | Not Available | Negative | 3208796 - 3209644 | 31506.0 |
| glucose/galactose transporter | SAMN05444682_10635 | Not Available | Negative | 3209847 - 3211142 | 47034.0 |
| dinb superfamily protein | SAMN05444682_10636 | Not Available | Negative | 3211528 - 3212040 | 19759.5 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05444682_10637 | Not Available | Negative | 3212021 - 3213256 | 47005.1 |
| hypothetical protein | SAMN05444682_10638 | Not Available | Positive | 3213270 - 3213494 | 8160.02 |
| glutamyl-trna synthetase | SAMN05444682_10639 | Not Available | Positive | 3213473 - 3214996 | 58167.2 |
| superfamily ii dna or rna helicase, snf2 family | SAMN05444682_10640 | Not Available | Negative | 3215273 - 3218158 | 112186.0 |
| helicase | SAMN05444682_10641 | Not Available | Negative | 3218477 - 3220696 | 84038.8 |
| duplicated orphan permease | SAMN05444682_10642 | Not Available | Positive | 3220976 - 3223399 | 89787.2 |
| ferrous iron transport protein a | SAMN05444682_10643 | Not Available | Positive | 3223484 - 3223732 | 9046.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
