Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN05444682_10624 | Not Available | Negative | 3199522 - 3200706 | 44735.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_10625 | Not Available | Positive | 3200818 - 3201405 | 22524.9 |
| nad(p)h-dependent fmn reductase | SAMN05444682_10626 | Not Available | Negative | 3201727 - 3202248 | 19824.7 |
| chromosome segregation atpase | SAMN05444682_10627 | Not Available | Positive | 3202374 - 3203171 | 29379.4 |
| chromosome partitioning protein, parb family | SAMN05444682_10628 | Not Available | Positive | 3203178 - 3204101 | 34500.8 |
| hypothetical protein | SAMN05444682_10629 | Not Available | Positive | 3204101 - 3204877 | 29214.1 |
| dihydrodipicolinate reductase | SAMN05444682_10630 | Not Available | Positive | 3204927 - 3205676 | 27552.7 |
| signal peptidase i | SAMN05444682_10631 | Not Available | Positive | 3205716 - 3207140 | 55054.0 |
| pyridoxine 5'-phosphate synthase | SAMN05444682_10632 | Not Available | Negative | 3207166 - 3207885 | 26254.2 |
| tigr00159 family protein | SAMN05444682_10633 | Not Available | Positive | 3207947 - 3208729 | 29298.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
