Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, deor family | SAMN05444682_10614 | Not Available | Positive | 3185527 - 3186291 | 27904.2 |
| hypothetical protein | SAMN05444682_10615 | Not Available | Negative | 3186288 - 3186638 | 13892.7 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444682_10616 | Not Available | Positive | 3186733 - 3187914 | 44839.4 |
| membrane dipeptidase | SAMN05444682_10617 | Not Available | Negative | 3187896 - 3189206 | 48226.6 |
| transcriptional regulator, tetr family | SAMN05444682_10618 | Not Available | Positive | 3189270 - 3189824 | 20769.5 |
| thioredoxin reductase | SAMN05444682_10619 | Not Available | Positive | 3189854 - 3190771 | 32958.5 |
| predicted zn-dependent peptidase | SAMN05444682_10620 | Not Available | Positive | 3190814 - 3192211 | 52562.6 |
| predicted zn-dependent peptidase | SAMN05444682_10621 | Not Available | Positive | 3192244 - 3193674 | 51981.7 |
| starch-binding associating with outer membrane | SAMN05444682_10622 | Not Available | Negative | 3193789 - 3195780 | 76296.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_10623 | Not Available | Negative | 3195802 - 3199398 | 134477.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
