Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lema protein | SAMN05444682_1064 | Not Available | Negative | 3174179 - 3174871 | 25305.3 |
| hypothetical protein | SAMN05444682_1065 | Not Available | Negative | 3174887 - 3175492 | 22739.7 |
| tetratricopeptide repeat-containing protein | SAMN05444682_1066 | Not Available | Positive | 3175778 - 3177562 | 66155.2 |
| two component transcriptional regulator, lyttr family | SAMN05444682_1067 | Not Available | Positive | 3177574 - 3178326 | 28330.2 |
| glycerophosphoryl diester phosphodiesterase | SAMN05444682_1068 | Not Available | Negative | 3178331 - 3179209 | 33022.6 |
| alpha-ribazole phosphatase/probable phosphoglycerate mutase | SAMN05444682_1069 | Not Available | Negative | 3179220 - 3179816 | 22152.2 |
| sugar (pentulose or hexulose) kinase | SAMN05444682_10610 | Not Available | Negative | 3179819 - 3181294 | 53306.3 |
| autoinducer 2 (ai-2) kinase | SAMN05444682_10611 | Not Available | Negative | 3181255 - 3182700 | 53280.5 |
| d-3-phosphoglycerate dehydrogenase | SAMN05444682_10612 | Not Available | Negative | 3182703 - 3183707 | 37240.6 |
| polyol permease family | SAMN05444682_10613 | Not Available | Negative | 3183750 - 3185015 | 46113.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
