Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosamine-6-phosphate deacetylase | SAMN05444682_105352 | Not Available | Positive | 3166679 - 3167791 | 39791.0 |
| aerobic c4-dicarboxylate transport protein | SAMN05444682_105353 | Not Available | Positive | 3167788 - 3169044 | 45095.0 |
| exodeoxyribonuclease vii small subunit | SAMN05444682_105354 | Not Available | Negative | 3169041 - 3169268 | 8329.7 |
| exodeoxyribonuclease vii large subunit | SAMN05444682_105355 | Not Available | Negative | 3169261 - 3170598 | 50372.9 |
| peptide deformylase | SAMN05444682_105356 | Not Available | Positive | 3170728 - 3171300 | 21951.6 |
| uncharacterized membrane protein yeih | SAMN05444682_105357 | Not Available | Negative | 3171303 - 3171905 | 21262.5 |
| hypothetical protein | SAMN05444682_105358 | Not Available | Negative | 3172295 - 3172591 | 11429.2 |
| hypothetical protein | SAMN05444682_1061 | Not Available | Negative | 3172753 - 3172862 | 3988.73 |
| hypothetical protein | SAMN05444682_1062 | Not Available | Positive | 3172892 - 3173083 | 6992.41 |
| lysophospholipase l1 | SAMN05444682_1063 | Not Available | Negative | 3173093 - 3174055 | 36159.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
