Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0176 protein | SAMN05444682_105342 | Not Available | Negative | 3159111 - 3160304 | 45051.1 |
| hypothetical protein | SAMN05444682_105343 | Not Available | Negative | 3160306 - 3160407 | 4102.16 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05444682_105344 | Not Available | Positive | 3160428 - 3160985 | 20441.4 |
| mfs transporter, dha1 family, bicyclomycin/chloramphenicol resistance protein | SAMN05444682_105345 | Not Available | Positive | 3161143 - 3162369 | 43432.2 |
| hypothetical protein | SAMN05444682_105346 | Not Available | Negative | 3162412 - 3163023 | 21896.7 |
| hypothetical protein | SAMN05444682_105347 | Not Available | Negative | 3163076 - 3163300 | 8675.94 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444682_105348 | Not Available | Negative | 3163315 - 3164067 | 28826.5 |
| methyltransferase domain-containing protein | SAMN05444682_105349 | Not Available | Negative | 3164067 - 3164795 | 27926.9 |
| polysaccharide pyruvyl transferase family protein wcak | SAMN05444682_105350 | Not Available | Negative | 3164792 - 3165757 | 37511.2 |
| transcriptional regulator, deor family | SAMN05444682_105351 | Not Available | Negative | 3165769 - 3166512 | 27126.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
