Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein yccf, duf307 family | SAMN05444682_105321 | Not Available | Negative | 3140404 - 3140772 | 13394.2 |
| histidyl-trna synthetase | SAMN05444682_105322 | Not Available | Negative | 3140769 - 3142160 | 51803.8 |
| ribonuclease-3 | SAMN05444682_105323 | Not Available | Negative | 3142210 - 3142941 | 27452.3 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | SAMN05444682_105324 | Not Available | Negative | 3143001 - 3144254 | 44314.6 |
| acyl carrier protein | SAMN05444682_105325 | Not Available | Negative | 3144282 - 3144518 | 8503.9 |
| hypothetical protein | SAMN05444682_105326 | Not Available | Positive | 3144761 - 3145183 | 16319.7 |
| pyruvate kinase | SAMN05444682_105327 | Not Available | Positive | 3145251 - 3146684 | 52649.6 |
| asparagine synthase (glutamine-hydrolysing) | SAMN05444682_105328 | Not Available | Positive | 3146778 - 3147509 | 27402.9 |
| hypothetical protein | SAMN05444682_105329 | Not Available | Negative | 3147490 - 3147849 | 13170.8 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN05444682_105330 | Not Available | Positive | 3147920 - 3149779 | 70593.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
