Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) domain-containing protein | SAMN05444682_101247 | Not Available | Positive | 303063 - 304019 | 36816.6 |
| hypothetical protein | SAMN05444682_101248 | Not Available | Negative | 304074 - 304529 | 16592.2 |
| hypothetical protein | SAMN05444682_101249 | Not Available | Positive | 304758 - 304976 | 7997.95 |
| cbs domain-containing protein | SAMN05444682_101250 | Not Available | Negative | 304993 - 305421 | 16278.9 |
| hypothetical protein | SAMN05444682_101251 | Not Available | Negative | 305598 - 306032 | 15866.2 |
| sprt-like family protein | SAMN05444682_101252 | Not Available | Negative | 306111 - 306743 | 24514.5 |
| na+:h+ antiporter, nhaa family | SAMN05444682_101253 | Not Available | Negative | 306857 - 308032 | 42152.7 |
| trna threonylcarbamoyl adenosine modification protein, sua5/ycio/yrdc/ywlc family | SAMN05444682_101254 | Not Available | Negative | 308063 - 308683 | 22857.4 |
| asparaginyl-trna synthetase | SAMN05444682_101255 | Not Available | Negative | 308699 - 310144 | 55112.7 |
| prolipoprotein diacylglyceryl transferase | SAMN05444682_101256 | Not Available | Negative | 310199 - 311041 | 31766.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
