Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium chelatase subunit i | SAMN05444682_105291 | Not Available | Positive | 3108422 - 3109900 | 55672.0 |
| hypothetical protein | SAMN05444682_105292 | Not Available | Negative | 3109878 - 3110375 | 18929.4 |
| hupe / urej protein | SAMN05444682_105293 | Not Available | Positive | 3110451 - 3111029 | 21581.9 |
| hypothetical protein | SAMN05444682_105294 | Not Available | Positive | 3111108 - 3113414 | 88392.3 |
| malate/lactate/ureidoglycolate dehydrogenase, ldh2 family | SAMN05444682_105295 | Not Available | Positive | 3113411 - 3114481 | 37876.4 |
| predicted o-methyltransferase yrrm | SAMN05444682_105296 | Not Available | Positive | 3114530 - 3115165 | 23684.6 |
| flagellum-specific peptidoglycan hydrolase flgj | SAMN05444682_105297 | Not Available | Positive | 3115186 - 3115875 | 26215.0 |
| flagellum-specific peptidoglycan hydrolase flgj | SAMN05444682_105298 | Not Available | Positive | 3115876 - 3116724 | 32421.6 |
| hypothetical protein | SAMN05444682_105299 | Not Available | Positive | 3116735 - 3117541 | 30290.0 |
| protein of unknown function | SAMN05444682_105300 | Not Available | Positive | 3117591 - 3118580 | 37752.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
