Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa-ompf porin, oop family | SAMN05444682_105272 | Not Available | Negative | 3086693 - 3088084 | 50058.9 |
| inorganic phosphate transporter, pit family | SAMN05444682_105273 | Not Available | Negative | 3088515 - 3089525 | 35753.3 |
| hypothetical protein | SAMN05444682_105274 | Not Available | Negative | 3089548 - 3090195 | 24561.4 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN05444682_105275 | Not Available | Negative | 3090265 - 3091296 | 39910.4 |
| phosphatidylserine decarboxylase | SAMN05444682_105276 | Not Available | Negative | 3091317 - 3091976 | 24926.5 |
| hypothetical protein | SAMN05444682_105277 | Not Available | Negative | 3092028 - 3093152 | 43497.3 |
| dna polymerase i | SAMN05444682_105278 | Not Available | Negative | 3093184 - 3095958 | 102743.0 |
| ribosome biogenesis gtpase | SAMN05444682_105279 | Not Available | Positive | 3096063 - 3097070 | 37275.6 |
| purine-nucleoside phosphorylase | SAMN05444682_105280 | Not Available | Positive | 3097124 - 3097942 | 30169.8 |
| putative porin | SAMN05444682_105281 | Not Available | Positive | 3097939 - 3099927 | 77360.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
