Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyl transferase of unknown function | SAMN05444682_105262 | Not Available | Negative | 3077350 - 3078075 | 28528.2 |
| ribosomal protein s18 acetylase rimi | SAMN05444682_105263 | Not Available | Negative | 3078140 - 3078664 | 19803.1 |
| hypothetical protein | SAMN05444682_105264 | Not Available | Negative | 3078668 - 3079231 | 20721.1 |
| amidohydrolase | SAMN05444682_105265 | Not Available | Negative | 3079245 - 3080426 | 42791.2 |
| sporulation related domain-containing protein | SAMN05444682_105266 | Not Available | Negative | 3080442 - 3080885 | 16769.1 |
| protein translocase subunit seca | SAMN05444682_105267 | Not Available | Negative | 3080904 - 3084197 | 123521.0 |
| 1,4-dihydroxy-6-naphthoate synthase | SAMN05444682_105268 | Not Available | Negative | 3084361 - 3085230 | 32525.3 |
| hypothetical protein | SAMN05444682_105269 | Not Available | Negative | 3085227 - 3085499 | 9918.75 |
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | SAMN05444682_105270 | Not Available | Negative | 3085496 - 3086272 | 28569.0 |
| uncharacterized conserved protein yjbj, upf0337 family | SAMN05444682_105271 | Not Available | Negative | 3086344 - 3086529 | 7040.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
