Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_105252 | Not Available | Negative | 3067626 - 3068120 | 19165.5 |
| hypothetical protein | SAMN05444682_105253 | Not Available | Negative | 3068133 - 3068360 | 8767.02 |
| ferritin-like metal-binding protein ycie | SAMN05444682_105254 | Not Available | Positive | 3068455 - 3069204 | 27208.8 |
| hypothetical protein | SAMN05444682_105255 | Not Available | Positive | 3069207 - 3069458 | 9325.07 |
| glucose 1-dehydrogenase | SAMN05444682_105256 | Not Available | Negative | 3069480 - 3070256 | 27835.9 |
| lysyl-trna synthetase, class 2 | SAMN05444682_105257 | Not Available | Positive | 3070361 - 3070561 | 7731.3 |
| glycine/d-amino acid oxidase | SAMN05444682_105258 | Not Available | Negative | 3070751 - 3072316 | 57130.6 |
| trehalose 6-phosphate synthase /trehalose 6-phosphatase | SAMN05444682_105259 | Not Available | Positive | 3072555 - 3074747 | 83107.1 |
| glucoamylase (glucan-1,4-alpha-glucosidase), gh15 family | SAMN05444682_105260 | Not Available | Negative | 3074737 - 3076524 | 68681.5 |
| predicted phosphoesterase | SAMN05444682_105261 | Not Available | Negative | 3076553 - 3077341 | 29147.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
