Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted dehydrogenase | SAMN05444682_105242 | Not Available | Negative | 3059163 - 3060263 | 40594.5 |
| erythromycin esterase homolog | SAMN05444682_105243 | Not Available | Negative | 3060275 - 3061594 | 50654.5 |
| predicted phosphoribosyltransferase | SAMN05444682_105244 | Not Available | Negative | 3061587 - 3062243 | 24119.8 |
| hypothetical protein | SAMN05444682_105245 | Not Available | Negative | 3062258 - 3062485 | 8335.92 |
| hypothetical protein | SAMN05444682_105246 | Not Available | Negative | 3062667 - 3063401 | 27833.4 |
| hypothetical protein | SAMN05444682_105247 | Not Available | Positive | 3063550 - 3063918 | 14453.1 |
| maltose alpha-d-glucosyltransferase/ alpha-amylase | SAMN05444682_105248 | Not Available | Positive | 3063927 - 3065555 | 62511.4 |
| probable non-f420 flavinoid oxidoreductase | SAMN05444682_105249 | Not Available | Positive | 3065557 - 3066516 | 36360.1 |
| rna polymerase, sigma subunit, ecf family | SAMN05444682_105250 | Not Available | Positive | 3066634 - 3067158 | 20622.7 |
| protein of unknown function | SAMN05444682_105251 | Not Available | Negative | 3067178 - 3067624 | 16523.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
