Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anthranilate synthase component 1 | SAMN05444682_105232 | Not Available | Positive | 3050550 - 3051959 | 54054.6 |
| anthranilate synthase, component ii | SAMN05444682_105233 | Not Available | Positive | 3051967 - 3052611 | 23331.8 |
| indole-3-glycerol phosphate synthase | SAMN05444682_105234 | Not Available | Positive | 3052638 - 3053420 | 28365.2 |
| pp_02479 | SAMN05444682_105235 | Not Available | Positive | 3053480 - 3054475 | Not Available |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05444682_105236 | Not Available | Negative | 3054487 - 3055983 | 56743.6 |
| acylphosphatase | SAMN05444682_105237 | Not Available | Negative | 3055994 - 3056299 | 11267.3 |
| glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase | SAMN05444682_105238 | Not Available | Positive | 3056648 - 3057163 | 19709.3 |
| predicted atpase | SAMN05444682_105239 | Not Available | Negative | 3057153 - 3057719 | 21482.8 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05444682_105240 | Not Available | Positive | 3057939 - 3058595 | 24933.6 |
| chromate reductase | SAMN05444682_105241 | Not Available | Positive | 3058625 - 3059179 | 20337.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
