Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444682_101237 | Not Available | Positive | 294376 - 294669 | 11223.0 |
| periplasmic chaperone for outer membrane proteins skp | SAMN05444682_101238 | Not Available | Negative | 294908 - 295483 | 20927.8 |
| hypothetical protein | SAMN05444682_101239 | Not Available | Negative | 295480 - 295641 | 6273.72 |
| periplasmic chaperone for outer membrane proteins skp | SAMN05444682_101240 | Not Available | Negative | 295589 - 296125 | 20576.5 |
| beta-barrel assembly machine subunit bama | SAMN05444682_101241 | Not Available | Negative | 296192 - 298747 | 96894.7 |
| undecaprenyl diphosphate synthase | SAMN05444682_101242 | Not Available | Negative | 298805 - 299548 | 28340.0 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05444682_101243 | Not Available | Negative | 299585 - 300418 | 31365.0 |
| nad+ kinase | SAMN05444682_101244 | Not Available | Negative | 300421 - 301305 | 32553.9 |
| cbs domain-containing protein | SAMN05444682_101245 | Not Available | Negative | 301310 - 301972 | 25071.7 |
| acyltransferase | SAMN05444682_101246 | Not Available | Positive | 302234 - 303058 | 31571.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
