Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ix secretion system membrane protein, porp/sprf family | SAMN05444682_105202 | Not Available | Negative | 3015257 - 3016264 | 37872.6 |
| gliding motility-associated c-terminal domain-containing protein | SAMN05444682_105203 | Not Available | Negative | 3016286 - 3017839 | 56880.6 |
| hypothetical protein | SAMN05444682_105204 | Not Available | Negative | 3017856 - 3019292 | 51591.4 |
| yd repeat-containing protein | SAMN05444682_105205 | Not Available | Negative | 3019322 - 3020714 | 51884.6 |
| rhs repeat | SAMN05444682_105206 | Not Available | Negative | 3020767 - 3022392 | 60492.4 |
| dna recombination protein rmuc | SAMN05444682_105207 | Not Available | Negative | 3022647 - 3023954 | 50094.8 |
| arginase family enzyme | SAMN05444682_105208 | Not Available | Negative | 3023983 - 3025248 | 47778.8 |
| nucleoside-diphosphate-sugar epimerase | SAMN05444682_105209 | Not Available | Positive | 3025293 - 3026276 | 35413.0 |
| d-3-phosphoglycerate dehydrogenase | SAMN05444682_105210 | Not Available | Positive | 3026278 - 3027570 | 49559.9 |
| 5-formyltetrahydrofolate cyclo-ligase | SAMN05444682_105211 | Not Available | Negative | 3027554 - 3028144 | 22603.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
