Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_105152 | Not Available | Positive | 2943561 - 2944310 | 28689.2 |
| hypothetical protein | SAMN05444682_105153 | Not Available | Positive | 2944609 - 2945466 | 32070.2 |
| n-sulfoglucosamine sulfohydrolase | SAMN05444682_105154 | Not Available | Negative | 2945499 - 2946899 | 52851.6 |
| starch-binding associating with outer membrane | SAMN05444682_105155 | Not Available | Negative | 2946912 - 2948372 | 55073.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_105156 | Not Available | Negative | 2948390 - 2951806 | 124931.0 |
| fecr family protein | SAMN05444682_105157 | Not Available | Negative | 2951967 - 2953142 | 44287.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_105158 | Not Available | Negative | 2953231 - 2953821 | 22837.6 |
| amidohydrolase | SAMN05444682_105159 | Not Available | Negative | 2953877 - 2954902 | 39919.1 |
| fructose-bisphosphate aldolase, class ii/tagatose 1,6-diphosphate aldolase gaty/kbay | SAMN05444682_105160 | Not Available | Negative | 2954949 - 2955770 | 29853.1 |
| sugar or nucleoside kinase, ribokinase family | SAMN05444682_105161 | Not Available | Negative | 2955754 - 2956755 | 36089.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
